Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Gm9103-201ENSMUST00000119371 405 ntBASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Gm8655-201ENSMUST00000221159 852 ntBASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-3J3QMG8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-3J3QMG8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-3J3QMG8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-3J3QMG8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-3J3QMG8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav13d-3J3QMG8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-3J3QMG8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-3J3QMG8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-3J3QMG8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav13d-3J3QMG8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-3J3QMG8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms