Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Gm6257-201ENSMUST00000163864 910 ntBASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Gm7889-201ENSMUST00000185591 958 ntBASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Gm37722-201ENSMUST00000193757 208 ntBASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh1F7BJK1 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdh1F7BJK1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdh1F7BJK1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdh1F7BJK1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdh1F7BJK1 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Pcdh1F7BJK1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh1F7BJK1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdh1F7BJK1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh1F7BJK1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh1F7BJK1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh1F7BJK1 Gm6433-201ENSMUST00000118634 875 ntBASIC14.08□□□□□ -0.16
Pcdh1F7BJK1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh1F7BJK1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Pcdh1F7BJK1 Gm45058-201ENSMUST00000205810 766 ntBASIC14.08□□□□□ -0.16
Pcdh1F7BJK1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Pcdh1F7BJK1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdh1F7BJK1 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh1F7BJK1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh1F7BJK1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh1F7BJK1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh1F7BJK1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdh1F7BJK1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh1F7BJK1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh1F7BJK1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh1F7BJK1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Pcdh1F7BJK1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh1F7BJK1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms