Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.71■□□□□ 0.59
Ube4aE9Q735 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ube4aE9Q735 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ube4aE9Q735 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ube4aE9Q735 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube4aE9Q735 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.71■□□□□ 0.59
Ube4aE9Q735 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ube4aE9Q735 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Ube4aE9Q735 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube4aE9Q735 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ube4aE9Q735 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube4aE9Q735 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube4aE9Q735 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.7■□□□□ 0.58
Ube4aE9Q735 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ube4aE9Q735 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ube4aE9Q735 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ube4aE9Q735 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4aE9Q735 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.7■□□□□ 0.58
Ube4aE9Q735 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4aE9Q735 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.7■□□□□ 0.58
Ube4aE9Q735 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Ube4aE9Q735 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4aE9Q735 Rpph1-201ENSMUST00000175096 319 ntBASIC18.7■□□□□ 0.58
Ube4aE9Q735 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4aE9Q735 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4aE9Q735 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4aE9Q735 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4aE9Q735 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4aE9Q735 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4aE9Q735 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4aE9Q735 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Ube4aE9Q735 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4aE9Q735 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4aE9Q735 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4aE9Q735 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4aE9Q735 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4aE9Q735 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4aE9Q735 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ube4aE9Q735 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4aE9Q735 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4aE9Q735 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4aE9Q735 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.69■□□□□ 0.58
Ube4aE9Q735 Gm16198-201ENSMUST00000118766 670 ntBASIC18.69■□□□□ 0.58
Ube4aE9Q735 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.69■□□□□ 0.58
Ube4aE9Q735 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.69■□□□□ 0.58
Ube4aE9Q735 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.69■□□□□ 0.58
Ube4aE9Q735 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.69■□□□□ 0.58
Ube4aE9Q735 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.69■□□□□ 0.58
Ube4aE9Q735 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Ube4aE9Q735 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Ube4aE9Q735 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4aE9Q735 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ube4aE9Q735 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4aE9Q735 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4aE9Q735 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4aE9Q735 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4aE9Q735 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ube4aE9Q735 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4aE9Q735 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4aE9Q735 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4aE9Q735 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4aE9Q735 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4aE9Q735 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4aE9Q735 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Ube4aE9Q735 Gm9385-201ENSMUST00000117563 472 ntBASIC18.68■□□□□ 0.58
Ube4aE9Q735 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.68■□□□□ 0.58
Ube4aE9Q735 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.68■□□□□ 0.58
Ube4aE9Q735 Auts2-212ENSMUST00000178555 309 ntBASIC18.68■□□□□ 0.58
Ube4aE9Q735 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.68■□□□□ 0.58
Ube4aE9Q735 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.68■□□□□ 0.58
Ube4aE9Q735 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.68■□□□□ 0.58
Ube4aE9Q735 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.68■□□□□ 0.58
Ube4aE9Q735 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4aE9Q735 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4aE9Q735 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4aE9Q735 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4aE9Q735 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.68■□□□□ 0.58
Ube4aE9Q735 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4aE9Q735 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4aE9Q735 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4aE9Q735 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4aE9Q735 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4aE9Q735 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4aE9Q735 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4aE9Q735 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4aE9Q735 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4aE9Q735 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4aE9Q735 Gm11745-201ENSMUST00000121669 448 ntBASIC18.67■□□□□ 0.58
Ube4aE9Q735 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.67■□□□□ 0.58
Ube4aE9Q735 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.67■□□□□ 0.58
Ube4aE9Q735 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.67■□□□□ 0.58
Ube4aE9Q735 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.67■□□□□ 0.58
Ube4aE9Q735 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4aE9Q735 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4aE9Q735 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.67■□□□□ 0.58
Ube4aE9Q735 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4aE9Q735 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4aE9Q735 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4aE9Q735 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ube4aE9Q735 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms