Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Herc1E9PZP8 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC8.65□□□□□ -1.03
Herc1E9PZP8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Herc1E9PZP8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Herc1E9PZP8 n-R5s14-201ENSMUST00000122688 107 ntBASIC8.65□□□□□ -1.03
Herc1E9PZP8 Gm38266-201ENSMUST00000194931 421 ntBASIC8.65□□□□□ -1.03
Herc1E9PZP8 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC8.65□□□□□ -1.03
Herc1E9PZP8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Herc1E9PZP8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Herc1E9PZP8 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC8.65□□□□□ -1.03
Herc1E9PZP8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.03
Herc1E9PZP8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Herc1E9PZP8 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Herc1E9PZP8 Zscan30-202ENSMUST00000224144 1458 ntBASIC8.65□□□□□ -1.03
Herc1E9PZP8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Gm13342-201ENSMUST00000121055 207 ntBASIC8.64□□□□□ -1.03
Herc1E9PZP8 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Proscos-202ENSMUST00000178990 666 ntBASIC8.64□□□□□ -1.03
Herc1E9PZP8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC8.64□□□□□ -1.03
Herc1E9PZP8 Gm45865-201ENSMUST00000211815 945 ntBASIC8.64□□□□□ -1.03
Herc1E9PZP8 AC158529.1-201ENSMUST00000223618 239 ntBASIC8.64□□□□□ -1.03
Herc1E9PZP8 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Gm5356-201ENSMUST00000093326 615 ntBASIC8.64□□□□□ -1.03
Herc1E9PZP8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Gm9719-201ENSMUST00000162765 543 ntBASIC8.64□□□□□ -1.03
Herc1E9PZP8 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Gm43058-201ENSMUST00000197645 625 ntBASIC8.64□□□□□ -1.03
Herc1E9PZP8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC8.64□□□□□ -1.03
Herc1E9PZP8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC8.64□□□□□ -1.03
Herc1E9PZP8 AC154687.2-201ENSMUST00000223853 640 ntBASIC8.64□□□□□ -1.03
Herc1E9PZP8 Arhgef33-207ENSMUST00000224966 490 ntBASIC8.64□□□□□ -1.03
Herc1E9PZP8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Herc1E9PZP8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Gm13813-201ENSMUST00000120998 787 ntBASIC8.63□□□□□ -1.03
Herc1E9PZP8 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Gm43213-201ENSMUST00000151866 1790 ntBASIC8.63□□□□□ -1.03
Herc1E9PZP8 Gm8775-201ENSMUST00000170943 1327 ntBASIC8.63□□□□□ -1.03
Herc1E9PZP8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC8.63□□□□□ -1.03
Herc1E9PZP8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC8.63□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms