Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Gm12260-201ENSMUST00000122447 411 ntBASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Gm27646-201ENSMUST00000183989 110 ntBASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh17E9PXF0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Gm2213-201ENSMUST00000197485 688 ntBASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh17E9PXF0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Pcdh17E9PXF0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.52□□□□□ -0.08
Pcdh17E9PXF0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh17E9PXF0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.52□□□□□ -0.08
Pcdh17E9PXF0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh17E9PXF0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh17E9PXF0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh17E9PXF0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Pcdh17E9PXF0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.08
Pcdh17E9PXF0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.52□□□□□ -0.08
Pcdh17E9PXF0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh17E9PXF0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh17E9PXF0 Gm9727-201ENSMUST00000161387 555 ntBASIC14.52□□□□□ -0.09
Pcdh17E9PXF0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pcdh17E9PXF0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh17E9PXF0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms