Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.72■□□□□ 0.11
Gm28043E0CXC2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28043E0CXC2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Gm28043E0CXC2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Gm28043E0CXC2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Gm28043E0CXC2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28043E0CXC2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28043E0CXC2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28043E0CXC2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28043E0CXC2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28043E0CXC2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28043E0CXC2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28043E0CXC2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28043E0CXC2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28043E0CXC2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.71■□□□□ 0.11
Gm28043E0CXC2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Gm28043E0CXC2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.71■□□□□ 0.11
Gm28043E0CXC2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28043E0CXC2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28043E0CXC2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28043E0CXC2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Gm28043E0CXC2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
Gm28043E0CXC2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Gm28043E0CXC2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Gm28043E0CXC2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28043E0CXC2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Gm6345-202ENSMUST00000180900 204 ntBASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Gm7977-201ENSMUST00000193787 748 ntBASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Gm28043E0CXC2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms