Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm44855-201ENSMUST00000205725 362 ntBASIC21.75■■□□□ 1.07
Hfm1D3Z4R1 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC21.75■■□□□ 1.07
Hfm1D3Z4R1 AC130829.1-201ENSMUST00000221548 494 ntBASIC21.75■■□□□ 1.07
Hfm1D3Z4R1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hfm1D3Z4R1 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hfm1D3Z4R1 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hfm1D3Z4R1 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hfm1D3Z4R1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hfm1D3Z4R1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hfm1D3Z4R1 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
Hfm1D3Z4R1 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC21.74■■□□□ 1.07
Hfm1D3Z4R1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hfm1D3Z4R1 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hfm1D3Z4R1 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hfm1D3Z4R1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Hfm1D3Z4R1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hfm1D3Z4R1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hfm1D3Z4R1 Gm45293-201ENSMUST00000209754 1812 ntBASIC21.74■■□□□ 1.07
Hfm1D3Z4R1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hfm1D3Z4R1 Syt7-204ENSMUST00000223586 1344 ntBASIC21.74■■□□□ 1.07
Hfm1D3Z4R1 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hfm1D3Z4R1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC21.74■■□□□ 1.07
Hfm1D3Z4R1 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Hfm1D3Z4R1 Gm8096-201ENSMUST00000209921 1591 ntBASIC21.74■■□□□ 1.07
Hfm1D3Z4R1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hfm1D3Z4R1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hfm1D3Z4R1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hfm1D3Z4R1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hfm1D3Z4R1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC21.73■■□□□ 1.07
Hfm1D3Z4R1 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Hfm1D3Z4R1 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hfm1D3Z4R1 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC21.73■■□□□ 1.07
Hfm1D3Z4R1 Gm27920-201ENSMUST00000183953 96 ntBASIC21.73■■□□□ 1.07
Hfm1D3Z4R1 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Hfm1D3Z4R1 AC135669.1-201ENSMUST00000213585 412 ntBASIC21.73■■□□□ 1.07
Hfm1D3Z4R1 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hfm1D3Z4R1 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Hfm1D3Z4R1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hfm1D3Z4R1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Hfm1D3Z4R1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Hfm1D3Z4R1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hfm1D3Z4R1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hfm1D3Z4R1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hfm1D3Z4R1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hfm1D3Z4R1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Hfm1D3Z4R1 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hfm1D3Z4R1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hfm1D3Z4R1 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC21.72■■□□□ 1.07
Hfm1D3Z4R1 Gm27533-201ENSMUST00000183800 152 ntBASIC21.72■■□□□ 1.07
Hfm1D3Z4R1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Hfm1D3Z4R1 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC21.72■■□□□ 1.07
Hfm1D3Z4R1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hfm1D3Z4R1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hfm1D3Z4R1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hfm1D3Z4R1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hfm1D3Z4R1 Gm3365-201ENSMUST00000216296 1480 ntBASIC21.72■■□□□ 1.07
Hfm1D3Z4R1 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hfm1D3Z4R1 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC21.72■■□□□ 1.07
Hfm1D3Z4R1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC21.72■■□□□ 1.07
Hfm1D3Z4R1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hfm1D3Z4R1 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Hfm1D3Z4R1 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Hfm1D3Z4R1 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Hfm1D3Z4R1 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Hfm1D3Z4R1 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Hfm1D3Z4R1 Syt7-205ENSMUST00000224135 1557 ntBASIC21.71■■□□□ 1.07
Hfm1D3Z4R1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Hfm1D3Z4R1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Hfm1D3Z4R1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Hfm1D3Z4R1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hfm1D3Z4R1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hfm1D3Z4R1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hfm1D3Z4R1 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hfm1D3Z4R1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hfm1D3Z4R1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hfm1D3Z4R1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hfm1D3Z4R1 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Hfm1D3Z4R1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Hfm1D3Z4R1 Gm12490-201ENSMUST00000120255 560 ntBASIC21.71■■□□□ 1.07
Hfm1D3Z4R1 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Hfm1D3Z4R1 Gm6473-201ENSMUST00000188572 1210 ntBASIC21.71■■□□□ 1.07
Hfm1D3Z4R1 Gm9794-201ENSMUST00000202370 423 ntBASIC21.71■■□□□ 1.07
Hfm1D3Z4R1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Hfm1D3Z4R1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Hfm1D3Z4R1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Hfm1D3Z4R1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Gm13233-201ENSMUST00000118760 1443 ntBASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Gm13244-201ENSMUST00000118855 1446 ntBASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms