Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gm3543D3Z235 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Gm11452-201ENSMUST00000122376 690 ntBASIC14.14□□□□□ -0.15
Gm3543D3Z235 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.14□□□□□ -0.15
Gm3543D3Z235 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.14□□□□□ -0.15
Gm3543D3Z235 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3543D3Z235 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3543D3Z235 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.13□□□□□ -0.15
Gm3543D3Z235 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.13□□□□□ -0.15
Gm3543D3Z235 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3543D3Z235 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.13□□□□□ -0.15
Gm3543D3Z235 Gm6376-201ENSMUST00000209407 580 ntBASIC14.13□□□□□ -0.15
Gm3543D3Z235 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.13□□□□□ -0.15
Gm3543D3Z235 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Gm3543D3Z235 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3543D3Z235 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.12□□□□□ -0.15
Gm3543D3Z235 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.12□□□□□ -0.15
Gm3543D3Z235 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3543D3Z235 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3543D3Z235 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms