Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30cD3YVI9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim30cD3YVI9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30cD3YVI9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30cD3YVI9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30cD3YVI9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim30cD3YVI9 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.11■□□□□ 0.33
Trim30cD3YVI9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Trim30cD3YVI9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30cD3YVI9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30cD3YVI9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Trim30cD3YVI9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30cD3YVI9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30cD3YVI9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim30cD3YVI9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30cD3YVI9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30cD3YVI9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim30cD3YVI9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30cD3YVI9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim30cD3YVI9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim30cD3YVI9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30cD3YVI9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim30cD3YVI9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim30cD3YVI9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim30cD3YVI9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim30cD3YVI9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim30cD3YVI9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trim30cD3YVI9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim30cD3YVI9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.08■□□□□ 0.33
Trim30cD3YVI9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim30cD3YVI9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim30cD3YVI9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim30cD3YVI9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim30cD3YVI9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim30cD3YVI9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms