Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Syce3B5KM66 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syce3B5KM66 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syce3B5KM66 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Syce3B5KM66 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Syce3B5KM66 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Syce3B5KM66 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.94■□□□□ 0.46
Syce3B5KM66 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Syce3B5KM66 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Syce3B5KM66 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syce3B5KM66 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Syce3B5KM66 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Syce3B5KM66 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Syce3B5KM66 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syce3B5KM66 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syce3B5KM66 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.93■□□□□ 0.46
Syce3B5KM66 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.93■□□□□ 0.46
Syce3B5KM66 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.93■□□□□ 0.46
Syce3B5KM66 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Syce3B5KM66 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syce3B5KM66 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syce3B5KM66 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Syce3B5KM66 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syce3B5KM66 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syce3B5KM66 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Syce3B5KM66 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syce3B5KM66 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syce3B5KM66 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.93■□□□□ 0.46
Syce3B5KM66 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.93■□□□□ 0.46
Syce3B5KM66 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Syce3B5KM66 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syce3B5KM66 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syce3B5KM66 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syce3B5KM66 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Syce3B5KM66 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Syce3B5KM66 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syce3B5KM66 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Syce3B5KM66 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syce3B5KM66 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syce3B5KM66 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syce3B5KM66 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syce3B5KM66 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syce3B5KM66 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syce3B5KM66 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syce3B5KM66 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.92■□□□□ 0.46
Syce3B5KM66 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Syce3B5KM66 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.92■□□□□ 0.46
Syce3B5KM66 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syce3B5KM66 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syce3B5KM66 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Syce3B5KM66 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syce3B5KM66 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Syce3B5KM66 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.92■□□□□ 0.46
Syce3B5KM66 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syce3B5KM66 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syce3B5KM66 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Syce3B5KM66 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Syce3B5KM66 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syce3B5KM66 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syce3B5KM66 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Syce3B5KM66 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syce3B5KM66 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Syce3B5KM66 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Syce3B5KM66 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syce3B5KM66 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syce3B5KM66 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.91■□□□□ 0.46
Syce3B5KM66 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syce3B5KM66 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.91■□□□□ 0.46
Syce3B5KM66 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syce3B5KM66 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syce3B5KM66 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syce3B5KM66 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Syce3B5KM66 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syce3B5KM66 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syce3B5KM66 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syce3B5KM66 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Syce3B5KM66 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.91■□□□□ 0.46
Syce3B5KM66 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syce3B5KM66 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Syce3B5KM66 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.9■□□□□ 0.46
Syce3B5KM66 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syce3B5KM66 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.9■□□□□ 0.46
Syce3B5KM66 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Syce3B5KM66 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syce3B5KM66 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syce3B5KM66 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syce3B5KM66 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Syce3B5KM66 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syce3B5KM66 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syce3B5KM66 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.9■□□□□ 0.46
Syce3B5KM66 Gm715-201ENSMUST00000117865 831 ntBASIC17.9■□□□□ 0.46
Syce3B5KM66 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Syce3B5KM66 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syce3B5KM66 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syce3B5KM66 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syce3B5KM66 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Syce3B5KM66 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Syce3B5KM66 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syce3B5KM66 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.9■□□□□ 0.46
Syce3B5KM66 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms