Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.72□□□□□ -0.53
Col6a5A6H584 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.72□□□□□ -0.53
Col6a5A6H584 Gm26461-201ENSMUST00000175064 290 ntBASIC11.72□□□□□ -0.53
Col6a5A6H584 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Col6a5A6H584 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.72□□□□□ -0.53
Col6a5A6H584 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a5A6H584 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a5A6H584 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a5A6H584 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a5A6H584 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a5A6H584 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a5A6H584 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.72□□□□□ -0.53
Col6a5A6H584 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a5A6H584 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Col6a5A6H584 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.72□□□□□ -0.53
Col6a5A6H584 Gm16570-201ENSMUST00000161951 436 ntBASIC11.72□□□□□ -0.53
Col6a5A6H584 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.72□□□□□ -0.53
Col6a5A6H584 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.72□□□□□ -0.53
Col6a5A6H584 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a5A6H584 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a5A6H584 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Col6a5A6H584 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a5A6H584 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Col6a5A6H584 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a5A6H584 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a5A6H584 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.71□□□□□ -0.53
Col6a5A6H584 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.71□□□□□ -0.53
Col6a5A6H584 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a5A6H584 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a5A6H584 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a5A6H584 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Col6a5A6H584 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.71□□□□□ -0.53
Col6a5A6H584 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a5A6H584 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a5A6H584 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a5A6H584 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a5A6H584 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Col6a5A6H584 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a5A6H584 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a5A6H584 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a5A6H584 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a5A6H584 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a5A6H584 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a5A6H584 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a5A6H584 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.71□□□□□ -0.54
Col6a5A6H584 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.71□□□□□ -0.54
Col6a5A6H584 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a5A6H584 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC11.7□□□□□ -0.54
Col6a5A6H584 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a5A6H584 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a5A6H584 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a5A6H584 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a5A6H584 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a5A6H584 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a5A6H584 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.7□□□□□ -0.54
Col6a5A6H584 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a5A6H584 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a5A6H584 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a5A6H584 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a5A6H584 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.7□□□□□ -0.54
Col6a5A6H584 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.7□□□□□ -0.54
Col6a5A6H584 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a5A6H584 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Col6a5A6H584 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.7□□□□□ -0.54
Col6a5A6H584 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a5A6H584 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a5A6H584 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a5A6H584 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a5A6H584 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Col6a5A6H584 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a5A6H584 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Col6a5A6H584 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a5A6H584 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Col6a5A6H584 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a5A6H584 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a5A6H584 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a5A6H584 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Col6a5A6H584 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.69□□□□□ -0.54
Col6a5A6H584 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a5A6H584 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.69□□□□□ -0.54
Col6a5A6H584 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.69□□□□□ -0.54
Col6a5A6H584 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a5A6H584 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a5A6H584 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a5A6H584 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a5A6H584 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.69□□□□□ -0.54
Col6a5A6H584 Gm13392-201ENSMUST00000117708 150 ntBASIC11.69□□□□□ -0.54
Col6a5A6H584 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.69□□□□□ -0.54
Col6a5A6H584 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.69□□□□□ -0.54
Col6a5A6H584 Gm10499-201ENSMUST00000174094 934 ntBASIC11.69□□□□□ -0.54
Col6a5A6H584 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a5A6H584 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a5A6H584 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a5A6H584 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Col6a5A6H584 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a5A6H584 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a5A6H584 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a5A6H584 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a5A6H584 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a5A6H584 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms