Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Gm5640A3KG49 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Gm5640A3KG49 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Gm5640A3KG49 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Gm5640A3KG49 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm5640A3KG49 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm5640A3KG49 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm5640A3KG49 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Gm5640A3KG49 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Gm5640A3KG49 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Gm5640A3KG49 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm5640A3KG49 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Gm5640A3KG49 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.91■□□□□ 0.14
Gm5640A3KG49 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Gm5640A3KG49 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm5640A3KG49 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Gm5640A3KG49 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Gm5640A3KG49 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.91■□□□□ 0.14
Gm5640A3KG49 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm5640A3KG49 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm5640A3KG49 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Gm5640A3KG49 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.91■□□□□ 0.14
Gm5640A3KG49 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm5640A3KG49 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm5640A3KG49 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm5640A3KG49 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5640A3KG49 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5640A3KG49 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5640A3KG49 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5640A3KG49 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5640A3KG49 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5640A3KG49 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5640A3KG49 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.9■□□□□ 0.14
Gm5640A3KG49 Gm11539-201ENSMUST00000119837 557 ntBASIC15.9■□□□□ 0.14
Gm5640A3KG49 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.9■□□□□ 0.14
Gm5640A3KG49 Gm10653-202ENSMUST00000139570 835 ntBASIC15.9■□□□□ 0.14
Gm5640A3KG49 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5640A3KG49 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5640A3KG49 Gm29707-201ENSMUST00000196325 491 ntBASIC15.9■□□□□ 0.14
Gm5640A3KG49 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5640A3KG49 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5640A3KG49 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5640A3KG49 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.9■□□□□ 0.14
Gm5640A3KG49 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5640A3KG49 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Gm5640A3KG49 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5640A3KG49 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5640A3KG49 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Gm5640A3KG49 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5640A3KG49 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm5640A3KG49 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5640A3KG49 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5640A3KG49 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5640A3KG49 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5640A3KG49 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Gm5640A3KG49 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5640A3KG49 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5640A3KG49 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5640A3KG49 Gm5643-201ENSMUST00000117081 966 ntBASIC15.89■□□□□ 0.13
Gm5640A3KG49 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5640A3KG49 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5640A3KG49 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5640A3KG49 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5640A3KG49 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5640A3KG49 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gm5640A3KG49 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Gm5640A3KG49 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.88■□□□□ 0.13
Gm5640A3KG49 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.88■□□□□ 0.13
Gm5640A3KG49 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.88■□□□□ 0.13
Gm5640A3KG49 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Gm5640A3KG49 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms