Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Snora78-201ENSMUST00000158630 128 ntBASIC12.61□□□□□ -0.39
Chd6A3KFM7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Gm22902-201ENSMUST00000158488 302 ntBASIC12.61□□□□□ -0.39
Chd6A3KFM7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.61□□□□□ -0.39
Chd6A3KFM7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Gm12008-201ENSMUST00000117791 755 ntBASIC12.61□□□□□ -0.39
Chd6A3KFM7 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Mir7032-201ENSMUST00000185154 79 ntBASIC12.61□□□□□ -0.39
Chd6A3KFM7 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.6□□□□□ -0.39
Chd6A3KFM7 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Gm13350-201ENSMUST00000120519 479 ntBASIC12.6□□□□□ -0.39
Chd6A3KFM7 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.6□□□□□ -0.39
Chd6A3KFM7 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.6□□□□□ -0.39
Chd6A3KFM7 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd6A3KFM7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Chd6A3KFM7 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Chd6A3KFM7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd6A3KFM7 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd6A3KFM7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Chd6A3KFM7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Chd6A3KFM7 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.59□□□□□ -0.39
Chd6A3KFM7 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.59□□□□□ -0.39
Chd6A3KFM7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd6A3KFM7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd6A3KFM7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd6A3KFM7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd6A3KFM7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.59□□□□□ -0.39
Chd6A3KFM7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd6A3KFM7 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.59□□□□□ -0.39
Chd6A3KFM7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chd6A3KFM7 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chd6A3KFM7 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd6A3KFM7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chd6A3KFM7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chd6A3KFM7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chd6A3KFM7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.58□□□□□ -0.39
Chd6A3KFM7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd6A3KFM7 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd6A3KFM7 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.58□□□□□ -0.4
Chd6A3KFM7 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.58□□□□□ -0.4
Chd6A3KFM7 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.58□□□□□ -0.4
Chd6A3KFM7 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.58□□□□□ -0.4
Chd6A3KFM7 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd6A3KFM7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd6A3KFM7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Chd6A3KFM7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms