Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col6a4A2AX52 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.17□□□□□ -0.3
Col6a4A2AX52 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.16□□□□□ -0.3
Col6a4A2AX52 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.16□□□□□ -0.3
Col6a4A2AX52 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a4A2AX52 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a4A2AX52 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Gm18246-201ENSMUST00000221023 728 ntBASIC13.15□□□□□ -0.3
Col6a4A2AX52 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a4A2AX52 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.14□□□□□ -0.31
Col6a4A2AX52 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.14□□□□□ -0.31
Col6a4A2AX52 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Gm5866-201ENSMUST00000177881 973 ntBASIC13.14□□□□□ -0.31
Col6a4A2AX52 Gm20553-201ENSMUST00000204205 844 ntBASIC13.14□□□□□ -0.31
Col6a4A2AX52 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.14□□□□□ -0.31
Col6a4A2AX52 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Col6a4A2AX52 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms