Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CtcflA2APF3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtcflA2APF3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CtcflA2APF3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
CtcflA2APF3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CtcflA2APF3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtcflA2APF3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtcflA2APF3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtcflA2APF3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
CtcflA2APF3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtcflA2APF3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtcflA2APF3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtcflA2APF3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtcflA2APF3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CtcflA2APF3 Gm37025-201ENSMUST00000195159 829 ntBASIC14.29□□□□□ -0.12
CtcflA2APF3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtcflA2APF3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtcflA2APF3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtcflA2APF3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CtcflA2APF3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtcflA2APF3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtcflA2APF3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CtcflA2APF3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtcflA2APF3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CtcflA2APF3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
CtcflA2APF3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CtcflA2APF3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CtcflA2APF3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
CtcflA2APF3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CtcflA2APF3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtcflA2APF3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtcflA2APF3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtcflA2APF3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.29□□□□□ -0.12
CtcflA2APF3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtcflA2APF3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CtcflA2APF3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CtcflA2APF3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.28□□□□□ -0.12
CtcflA2APF3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.28□□□□□ -0.12
CtcflA2APF3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.28□□□□□ -0.12
CtcflA2APF3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.28□□□□□ -0.12
CtcflA2APF3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CtcflA2APF3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.28□□□□□ -0.12
CtcflA2APF3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CtcflA2APF3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CtcflA2APF3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.28□□□□□ -0.12
CtcflA2APF3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CtcflA2APF3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CtcflA2APF3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CtcflA2APF3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CtcflA2APF3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CtcflA2APF3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CtcflA2APF3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CtcflA2APF3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtcflA2APF3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtcflA2APF3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtcflA2APF3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CtcflA2APF3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtcflA2APF3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.27□□□□□ -0.13
CtcflA2APF3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.27□□□□□ -0.13
CtcflA2APF3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtcflA2APF3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CtcflA2APF3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtcflA2APF3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtcflA2APF3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CtcflA2APF3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CtcflA2APF3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CtcflA2APF3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtcflA2APF3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
CtcflA2APF3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtcflA2APF3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtcflA2APF3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CtcflA2APF3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtcflA2APF3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtcflA2APF3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms