Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Ubr4A2AN08 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC8.15□□□□□ -1.11
Ubr4A2AN08 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ubr4A2AN08 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ubr4A2AN08 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Ubr4A2AN08 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC8.15□□□□□ -1.11
Ubr4A2AN08 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ubr4A2AN08 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ubr4A2AN08 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ubr4A2AN08 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Gm5566-201ENSMUST00000116118 459 ntBASIC8.14□□□□□ -1.11
Ubr4A2AN08 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Mir6392-201ENSMUST00000184924 108 ntBASIC8.14□□□□□ -1.11
Ubr4A2AN08 Gm9445-201ENSMUST00000207454 1285 ntBASIC8.14□□□□□ -1.11
Ubr4A2AN08 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC8.14□□□□□ -1.11
Ubr4A2AN08 Gm18730-201ENSMUST00000218038 343 ntBASIC8.14□□□□□ -1.11
Ubr4A2AN08 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Dctn4-202ENSMUST00000223590 1530 ntBASIC8.14□□□□□ -1.11
Ubr4A2AN08 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Gm43213-201ENSMUST00000151866 1790 ntBASIC8.14□□□□□ -1.11
Ubr4A2AN08 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Gm3961-201ENSMUST00000204425 994 ntBASIC8.14□□□□□ -1.11
Ubr4A2AN08 Gm19164-201ENSMUST00000210667 640 ntBASIC8.14□□□□□ -1.11
Ubr4A2AN08 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Gm5912-201ENSMUST00000122282 1438 ntBASIC8.14□□□□□ -1.11
Ubr4A2AN08 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Gm27438-201ENSMUST00000183480 110 ntBASIC8.14□□□□□ -1.11
Ubr4A2AN08 Gm8894-201ENSMUST00000074642 666 ntBASIC8.14□□□□□ -1.11
Ubr4A2AN08 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC8.14□□□□□ -1.11
Ubr4A2AN08 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC8.14□□□□□ -1.11
Ubr4A2AN08 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ubr4A2AN08 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Gm27839-201ENSMUST00000184242 106 ntBASIC8.14□□□□□ -1.11
Ubr4A2AN08 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC8.14□□□□□ -1.11
Ubr4A2AN08 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC8.14□□□□□ -1.11
Ubr4A2AN08 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC8.14□□□□□ -1.11
Ubr4A2AN08 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Rps4l-202ENSMUST00000204242 789 ntBASIC8.13□□□□□ -1.11
Ubr4A2AN08 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC8.13□□□□□ -1.11
Ubr4A2AN08 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC8.13□□□□□ -1.11
Ubr4A2AN08 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ubr4A2AN08 AC126253.1-201ENSMUST00000227974 824 ntBASIC8.13□□□□□ -1.11
Ubr4A2AN08 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Ubr4A2AN08 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms