Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.59□□□□□ -0.07
IsxA1A546 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.59□□□□□ -0.07
IsxA1A546 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
IsxA1A546 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
IsxA1A546 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
IsxA1A546 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
IsxA1A546 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.58□□□□□ -0.07
IsxA1A546 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
IsxA1A546 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
IsxA1A546 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IsxA1A546 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.58□□□□□ -0.08
IsxA1A546 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
IsxA1A546 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.58□□□□□ -0.08
IsxA1A546 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.58□□□□□ -0.08
IsxA1A546 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IsxA1A546 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IsxA1A546 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
IsxA1A546 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IsxA1A546 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IsxA1A546 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
IsxA1A546 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IsxA1A546 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IsxA1A546 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IsxA1A546 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
IsxA1A546 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IsxA1A546 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.58□□□□□ -0.08
IsxA1A546 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
IsxA1A546 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IsxA1A546 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IsxA1A546 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
IsxA1A546 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IsxA1A546 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IsxA1A546 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
IsxA1A546 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IsxA1A546 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.57□□□□□ -0.08
IsxA1A546 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IsxA1A546 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
IsxA1A546 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.57□□□□□ -0.08
IsxA1A546 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.57□□□□□ -0.08
IsxA1A546 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IsxA1A546 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IsxA1A546 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IsxA1A546 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IsxA1A546 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IsxA1A546 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IsxA1A546 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
IsxA1A546 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IsxA1A546 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IsxA1A546 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IsxA1A546 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IsxA1A546 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
IsxA1A546 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IsxA1A546 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
IsxA1A546 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
IsxA1A546 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IsxA1A546 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IsxA1A546 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
IsxA1A546 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
IsxA1A546 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
IsxA1A546 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IsxA1A546 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IsxA1A546 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IsxA1A546 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
IsxA1A546 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.56□□□□□ -0.08
IsxA1A546 Gm12382-201ENSMUST00000122005 922 ntBASIC14.56□□□□□ -0.08
IsxA1A546 Gm18958-201ENSMUST00000174258 762 ntBASIC14.56□□□□□ -0.08
IsxA1A546 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.56□□□□□ -0.08
IsxA1A546 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IsxA1A546 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
IsxA1A546 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IsxA1A546 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IsxA1A546 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IsxA1A546 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IsxA1A546 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IsxA1A546 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
IsxA1A546 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
IsxA1A546 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IsxA1A546 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms