Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Gm7222-201ENSMUST00000117512 906 ntBASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Gm24513-201ENSMUST00000174964 138 ntBASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Gm27628-201ENSMUST00000184911 107 ntBASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Gm27397-201ENSMUST00000184997 107 ntBASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap99A0A140LIX9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.69■□□□□ 0.58
Cfap99A0A140LIX9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap99A0A140LIX9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap99A0A140LIX9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.69■□□□□ 0.58
Cfap99A0A140LIX9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap99A0A140LIX9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.69■□□□□ 0.58
Cfap99A0A140LIX9 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.69■□□□□ 0.58
Cfap99A0A140LIX9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap99A0A140LIX9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap99A0A140LIX9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap99A0A140LIX9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap99A0A140LIX9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap99A0A140LIX9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap99A0A140LIX9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cfap99A0A140LIX9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap99A0A140LIX9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap99A0A140LIX9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap99A0A140LIX9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap99A0A140LIX9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap99A0A140LIX9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap99A0A140LIX9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap99A0A140LIX9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap99A0A140LIX9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap99A0A140LIX9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap99A0A140LIX9 Gm23935-201ENSMUST00000102303 57 ntBASIC18.67■□□□□ 0.58
Cfap99A0A140LIX9 Gm24270-201ENSMUST00000102326 57 ntBASIC18.67■□□□□ 0.58
Cfap99A0A140LIX9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.67■□□□□ 0.58
Cfap99A0A140LIX9 Gm24245-201ENSMUST00000157318 57 ntBASIC18.67■□□□□ 0.58
Cfap99A0A140LIX9 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.67■□□□□ 0.58
Cfap99A0A140LIX9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap99A0A140LIX9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.67■□□□□ 0.58
Cfap99A0A140LIX9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap99A0A140LIX9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap99A0A140LIX9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap99A0A140LIX9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap99A0A140LIX9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap99A0A140LIX9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms