Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm37179-201ENSMUST00000194862 823 ntBASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm27275-201ENSMUST00000184318 272 ntBASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm29707-201ENSMUST00000196325 491 ntBASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm7791-201ENSMUST00000219066 539 ntBASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.21□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms