Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Gm13597-201ENSMUST00000121239 375 ntBASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Gm26308-201ENSMUST00000157768 69 ntBASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-42A0A0A6YY38 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-42A0A0A6YY38 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-42A0A0A6YY38 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-42A0A0A6YY38 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-42A0A0A6YY38 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-42A0A0A6YY38 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-42A0A0A6YY38 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.39□□□□□ -0.11
Ighv1-42A0A0A6YY38 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-42A0A0A6YY38 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-42A0A0A6YY38 Gm44492-201ENSMUST00000197012 141 ntBASIC14.39□□□□□ -0.11
Ighv1-42A0A0A6YY38 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-42A0A0A6YY38 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.39□□□□□ -0.11
Ighv1-42A0A0A6YY38 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-42A0A0A6YY38 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ighv1-42A0A0A6YY38 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-42A0A0A6YY38 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ighv1-42A0A0A6YY38 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-42A0A0A6YY38 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.39□□□□□ -0.11
Ighv1-42A0A0A6YY38 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ighv1-42A0A0A6YY38 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.39□□□□□ -0.11
Ighv1-42A0A0A6YY38 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-42A0A0A6YY38 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Gm17968-201ENSMUST00000194902 784 ntBASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-42A0A0A6YY38 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-42A0A0A6YY38 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-42A0A0A6YY38 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms