Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gm25016-201ENSMUST00000158399 131 ntBASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav21-dv12A0A075B6C4 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gm23634-201ENSMUST00000175071 91 ntBASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gm17808-201ENSMUST00000200859 894 ntBASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav21-dv12A0A075B6C4 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gm45328-201ENSMUST00000210942 917 ntBASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav21-dv12A0A075B6C4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav21-dv12A0A075B6C4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav21-dv12A0A075B6C4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms