Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm27389-201ENSMUST00000183622 195 ntBASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6n-6A0A075B6B2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6n-6A0A075B6B2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6n-6A0A075B6B2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6n-6A0A075B6B2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6n-6A0A075B6B2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6n-6A0A075B6B2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6n-6A0A075B6B2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6n-6A0A075B6B2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.54
Trav6n-6A0A075B6B2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6n-6A0A075B6B2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Trav6n-6A0A075B6B2 BC037039-201ENSMUST00000192003 2205 ntBASIC11.71□□□□□ -0.54
Trav6n-6A0A075B6B2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6n-6A0A075B6B2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6n-6A0A075B6B2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6n-6A0A075B6B2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.71□□□□□ -0.54
Trav6n-6A0A075B6B2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6n-6A0A075B6B2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trav6n-6A0A075B6B2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6n-6A0A075B6B2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm18101-201ENSMUST00000215769 548 ntBASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6n-6A0A075B6B2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Mir1668-201ENSMUST00000184114 107 ntBASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6n-6A0A075B6B2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms