Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Gm6623-201ENSMUST00000173570 544 ntBASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav9d-1A0A075B699 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-1A0A075B699 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav9d-1A0A075B699 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav9d-1A0A075B699 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
Trav9d-1A0A075B699 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav9d-1A0A075B699 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Trav9d-1A0A075B699 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Gm10013-201ENSMUST00000106074 672 ntBASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms