Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.45□□□□□ -0.42
Trav17A0A075B655 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.45□□□□□ -0.42
Trav17A0A075B655 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav17A0A075B655 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav17A0A075B655 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Gm8520-201ENSMUST00000186517 868 ntBASIC12.44□□□□□ -0.42
Trav17A0A075B655 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.44□□□□□ -0.42
Trav17A0A075B655 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav17A0A075B655 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.44□□□□□ -0.42
Trav17A0A075B655 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav17A0A075B655 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav17A0A075B655 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Trav17A0A075B655 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.43□□□□□ -0.42
Trav17A0A075B655 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Gm26039-201ENSMUST00000158152 144 ntBASIC12.43□□□□□ -0.42
Trav17A0A075B655 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav17A0A075B655 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav17A0A075B655 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms