Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.13□□□□□ -0.47
Trav16A0A075B653 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.12□□□□□ -0.47
Trav16A0A075B653 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Gm12527-201ENSMUST00000117967 564 ntBASIC12.12□□□□□ -0.47
Trav16A0A075B653 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16A0A075B653 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.11□□□□□ -0.47
Trav16A0A075B653 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.11□□□□□ -0.47
Trav16A0A075B653 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Gm18421-201ENSMUST00000204122 625 ntBASIC12.11□□□□□ -0.47
Trav16A0A075B653 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav16A0A075B653 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.11□□□□□ -0.47
Trav16A0A075B653 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav16A0A075B653 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Gm11539-201ENSMUST00000119837 557 ntBASIC12.1□□□□□ -0.47
Trav16A0A075B653 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav16A0A075B653 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms