Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Gm11539-201ENSMUST00000119837 557 ntBASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Gm4217-201ENSMUST00000182243 1002 ntBASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Gm27463-201ENSMUST00000183569 57 ntBASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Gm43353-201ENSMUST00000199224 1295 ntBASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Gm18421-201ENSMUST00000204122 625 ntBASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Arhgef4-208ENSMUST00000211073 171 ntBASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 AC153881.1-201ENSMUST00000214448 284 ntBASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Trav13-2A0A075B649 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Gm13168-201ENSMUST00000121771 632 ntBASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Gm10653-202ENSMUST00000139570 835 ntBASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Gm3375-201ENSMUST00000203929 796 ntBASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 AC163637.1-201ENSMUST00000215491 1894 ntBASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-2A0A075B649 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav13-2A0A075B649 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
Trav13-2A0A075B649 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav13-2A0A075B649 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav13-2A0A075B649 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav13-2A0A075B649 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav13-2A0A075B649 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav13-2A0A075B649 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-2A0A075B649 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-2A0A075B649 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-2A0A075B649 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-2A0A075B649 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-2A0A075B649 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-2A0A075B649 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC10.52□□□□□ -0.73
Trav13-2A0A075B649 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav13-2A0A075B649 Gm44450-201ENSMUST00000199528 114 ntBASIC10.52□□□□□ -0.73
Trav13-2A0A075B649 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav13-2A0A075B649 Odf3b-204ENSMUST00000227834 930 ntBASIC10.52□□□□□ -0.73
Trav13-2A0A075B649 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-2A0A075B649 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-2A0A075B649 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-2A0A075B649 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trav13-2A0A075B649 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-2A0A075B649 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms