Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8n-2A0A075B633 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.27□□□□□ -0.12
Trav8n-2A0A075B633 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8n-2A0A075B633 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav8n-2A0A075B633 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8n-2A0A075B633 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8n-2A0A075B633 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8n-2A0A075B633 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8n-2A0A075B633 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trav8n-2A0A075B633 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Trav8n-2A0A075B633 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8n-2A0A075B633 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8n-2A0A075B633 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.27□□□□□ -0.12
Trav8n-2A0A075B633 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.27□□□□□ -0.12
Trav8n-2A0A075B633 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Trav8n-2A0A075B633 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8n-2A0A075B633 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav8n-2A0A075B633 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8n-2A0A075B633 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8n-2A0A075B633 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.27□□□□□ -0.13
Trav8n-2A0A075B633 Mir6990-201ENSMUST00000183724 91 ntBASIC14.27□□□□□ -0.13
Trav8n-2A0A075B633 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav8n-2A0A075B633 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8n-2A0A075B633 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav8n-2A0A075B633 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8n-2A0A075B633 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8n-2A0A075B633 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav8n-2A0A075B633 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8n-2A0A075B633 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Trav8n-2A0A075B633 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8n-2A0A075B633 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Haglr-201ENSMUST00000100000 2085 ntBASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Gm12008-201ENSMUST00000117791 755 ntBASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Grk6-207ENSMUST00000225925 2769 ntBASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8n-2A0A075B633 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Gm18889-201ENSMUST00000174284 929 ntBASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms