Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv4A0A075B5I2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.69■□□□□ 0.1
Trbv4A0A075B5I2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv4A0A075B5I2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv4A0A075B5I2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv4A0A075B5I2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.68■□□□□ 0.1
Trbv4A0A075B5I2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Gm19164-201ENSMUST00000210667 640 ntBASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv4A0A075B5I2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Gm18669-201ENSMUST00000216049 778 ntBASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 BC037039-201ENSMUST00000192003 2205 ntBASIC15.66■□□□□ 0.1
Trbv4A0A075B5I2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Trbv4A0A075B5I2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv4A0A075B5I2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms