Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Gm44430-201ENSMUST00000203376 995 ntBASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb1S4R1E0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Mir6982-201ENSMUST00000184354 68 ntBASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb1S4R1E0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Sybu-209ENSMUST00000228639 4113 ntBASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1S4R1E0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb1S4R1E0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.21□□□□□ -0.13
H2afb1S4R1E0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb1S4R1E0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb1S4R1E0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.21□□□□□ -0.13
H2afb1S4R1E0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
H2afb1S4R1E0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
H2afb1S4R1E0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb1S4R1E0 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.21□□□□□ -0.13
H2afb1S4R1E0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.21□□□□□ -0.13
H2afb1S4R1E0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb1S4R1E0 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms