Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Gm16061-201ENSMUST00000122167 857 ntBASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Gm20760-201ENSMUST00000179197 648 ntBASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Gm7213-201ENSMUST00000215977 950 ntBASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cr1Q9Z0D9 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cr1Q9Z0D9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cx3cr1Q9Z0D9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cx3cr1Q9Z0D9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cx3cr1Q9Z0D9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Cx3cr1Q9Z0D9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.27□□□□□ -0.28
Cx3cr1Q9Z0D9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cx3cr1Q9Z0D9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Cx3cr1Q9Z0D9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cx3cr1Q9Z0D9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cx3cr1Q9Z0D9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cx3cr1Q9Z0D9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cx3cr1Q9Z0D9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cx3cr1Q9Z0D9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cx3cr1Q9Z0D9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.27□□□□□ -0.28
Cx3cr1Q9Z0D9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.27□□□□□ -0.29
Cx3cr1Q9Z0D9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cr1Q9Z0D9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cr1Q9Z0D9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cx3cr1Q9Z0D9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms