Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 Gm27301-201ENSMUST00000184012 127 ntBASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.67■□□□□ 0.1
Scn8aQ9WTU3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Gm45747-201ENSMUST00000212203 999 ntBASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Scn8aQ9WTU3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Gm27702-201ENSMUST00000184512 56 ntBASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Scn8aQ9WTU3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn8aQ9WTU3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms