Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgn5Q9JL35 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.67■□□□□ 0.42
Hmgn5Q9JL35 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgn5Q9JL35 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgn5Q9JL35 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgn5Q9JL35 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgn5Q9JL35 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgn5Q9JL35 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgn5Q9JL35 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgn5Q9JL35 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hmgn5Q9JL35 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgn5Q9JL35 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgn5Q9JL35 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgn5Q9JL35 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgn5Q9JL35 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgn5Q9JL35 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Gm12527-201ENSMUST00000117967 564 ntBASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Gm3375-201ENSMUST00000203929 796 ntBASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn5Q9JL35 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn5Q9JL35 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.64■□□□□ 0.42
Hmgn5Q9JL35 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Hmgn5Q9JL35 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn5Q9JL35 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn5Q9JL35 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.63■□□□□ 0.41
Hmgn5Q9JL35 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.63■□□□□ 0.41
Hmgn5Q9JL35 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Hmgn5Q9JL35 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn5Q9JL35 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn5Q9JL35 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn5Q9JL35 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms