Protein–RNA interactions for Protein: Q9JKY0

Cnot9, CCR4-NOT transcription complex subunit 9, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot9Q9JKY0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.47□□□□□ -0.09
Cnot9Q9JKY0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cnot9Q9JKY0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cnot9Q9JKY0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cnot9Q9JKY0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cnot9Q9JKY0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cnot9Q9JKY0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cnot9Q9JKY0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cnot9Q9JKY0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cnot9Q9JKY0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cnot9Q9JKY0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cnot9Q9JKY0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.47□□□□□ -0.09
Cnot9Q9JKY0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cnot9Q9JKY0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cnot9Q9JKY0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cnot9Q9JKY0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cnot9Q9JKY0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cnot9Q9JKY0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Rprl3-201ENSMUST00000157400 290 ntBASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Gm6257-201ENSMUST00000163864 910 ntBASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cnot9Q9JKY0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cnot9Q9JKY0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cnot9Q9JKY0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cnot9Q9JKY0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cnot9Q9JKY0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cnot9Q9JKY0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cnot9Q9JKY0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cnot9Q9JKY0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cnot9Q9JKY0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cnot9Q9JKY0 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cnot9Q9JKY0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.45□□□□□ -0.1
Cnot9Q9JKY0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cnot9Q9JKY0 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cnot9Q9JKY0 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.45□□□□□ -0.1
Cnot9Q9JKY0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Cnot9Q9JKY0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Cnot9Q9JKY0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cnot9Q9JKY0 Gm25406-201ENSMUST00000157599 105 ntBASIC14.45□□□□□ -0.1
Cnot9Q9JKY0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cnot9Q9JKY0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cnot9Q9JKY0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.45□□□□□ -0.1
Cnot9Q9JKY0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.45□□□□□ -0.1
Cnot9Q9JKY0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.45□□□□□ -0.1
Cnot9Q9JKY0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cnot9Q9JKY0 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.45□□□□□ -0.1
Cnot9Q9JKY0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cnot9Q9JKY0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cnot9Q9JKY0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cnot9Q9JKY0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cnot9Q9JKY0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 Gm44454-201ENSMUST00000198541 138 ntBASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cnot9Q9JKY0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms