Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.36□□□□□ -0.27
Rbfox1Q9JJ43 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 Mir770-201ENSMUST00000103252 94 ntBASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rbfox1Q9JJ43 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rbfox1Q9JJ43 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rbfox1Q9JJ43 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rbfox1Q9JJ43 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rbfox1Q9JJ43 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms