Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lime1Q9EQR5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lime1Q9EQR5 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.63□□□□□ -0.23
Lime1Q9EQR5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lime1Q9EQR5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lime1Q9EQR5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lime1Q9EQR5 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lime1Q9EQR5 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lime1Q9EQR5 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lime1Q9EQR5 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lime1Q9EQR5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lime1Q9EQR5 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lime1Q9EQR5 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lime1Q9EQR5 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Lime1Q9EQR5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lime1Q9EQR5 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Lime1Q9EQR5 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.63□□□□□ -0.23
Lime1Q9EQR5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Lime1Q9EQR5 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Lime1Q9EQR5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Lime1Q9EQR5 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lime1Q9EQR5 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.62□□□□□ -0.23
Lime1Q9EQR5 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lime1Q9EQR5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lime1Q9EQR5 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lime1Q9EQR5 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.62□□□□□ -0.23
Lime1Q9EQR5 Gm6623-201ENSMUST00000173570 544 ntBASIC13.62□□□□□ -0.23
Lime1Q9EQR5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.62□□□□□ -0.23
Lime1Q9EQR5 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.62□□□□□ -0.23
Lime1Q9EQR5 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.62□□□□□ -0.23
Lime1Q9EQR5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lime1Q9EQR5 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lime1Q9EQR5 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lime1Q9EQR5 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lime1Q9EQR5 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lime1Q9EQR5 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Lime1Q9EQR5 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lime1Q9EQR5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lime1Q9EQR5 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lime1Q9EQR5 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lime1Q9EQR5 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lime1Q9EQR5 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Gm10013-201ENSMUST00000106074 672 ntBASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Lime1Q9EQR5 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Gm14722-201ENSMUST00000118943 689 ntBASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Gm13312-201ENSMUST00000119631 718 ntBASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Gm5587-201ENSMUST00000206270 674 ntBASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms