Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm27306-201ENSMUST00000183970 107 ntBASIC16.03■□□□□ 0.16
Nkx2-4Q9EQM3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.03■□□□□ 0.16
Nkx2-4Q9EQM3 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-4Q9EQM3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-4Q9EQM3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-4Q9EQM3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-4Q9EQM3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.03■□□□□ 0.16
Nkx2-4Q9EQM3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-4Q9EQM3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkx2-4Q9EQM3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nkx2-4Q9EQM3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nkx2-4Q9EQM3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Nkx2-4Q9EQM3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nkx2-4Q9EQM3 Gm6415-201ENSMUST00000118488 348 ntBASIC16.02■□□□□ 0.16
Nkx2-4Q9EQM3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.02■□□□□ 0.16
Nkx2-4Q9EQM3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.02■□□□□ 0.16
Nkx2-4Q9EQM3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Nkx2-4Q9EQM3 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nkx2-4Q9EQM3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nkx2-4Q9EQM3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.02■□□□□ 0.16
Nkx2-4Q9EQM3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nkx2-4Q9EQM3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Nkx2-4Q9EQM3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.02■□□□□ 0.16
Nkx2-4Q9EQM3 Gm10154-201ENSMUST00000084445 354 ntBASIC16.02■□□□□ 0.16
Nkx2-4Q9EQM3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nkx2-4Q9EQM3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.02■□□□□ 0.15
Nkx2-4Q9EQM3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nkx2-4Q9EQM3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nkx2-4Q9EQM3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Nkx2-4Q9EQM3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Gm7653-201ENSMUST00000214567 508 ntBASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-4Q9EQM3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-4Q9EQM3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms