Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Upf1Q9EPU0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.65■□□□□ 0.42
Upf1Q9EPU0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upf1Q9EPU0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upf1Q9EPU0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upf1Q9EPU0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Upf1Q9EPU0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Upf1Q9EPU0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Gm5566-201ENSMUST00000116118 459 ntBASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Gm12390-201ENSMUST00000117897 397 ntBASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Gm9719-201ENSMUST00000162765 543 ntBASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Gm10499-201ENSMUST00000174094 934 ntBASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Rn7s1-201ENSMUST00000174924 300 ntBASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Rn7s2-201ENSMUST00000175032 300 ntBASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Gm26461-201ENSMUST00000175064 290 ntBASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Gm27920-201ENSMUST00000183953 96 ntBASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Gm37424-201ENSMUST00000191727 561 ntBASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Upf1Q9EPU0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC17.64■□□□□ 0.41
Upf1Q9EPU0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upf1Q9EPU0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Upf1Q9EPU0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upf1Q9EPU0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upf1Q9EPU0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.63■□□□□ 0.41
Upf1Q9EPU0 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.63■□□□□ 0.41
Upf1Q9EPU0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upf1Q9EPU0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Upf1Q9EPU0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upf1Q9EPU0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upf1Q9EPU0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upf1Q9EPU0 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.63■□□□□ 0.41
Upf1Q9EPU0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.63■□□□□ 0.41
Upf1Q9EPU0 Gm10766-202ENSMUST00000194123 606 ntBASIC17.63■□□□□ 0.41
Upf1Q9EPU0 Gm3786-201ENSMUST00000202659 378 ntBASIC17.63■□□□□ 0.41
Upf1Q9EPU0 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.63■□□□□ 0.41
Upf1Q9EPU0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upf1Q9EPU0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upf1Q9EPU0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.63■□□□□ 0.41
Upf1Q9EPU0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Gm16570-201ENSMUST00000161951 436 ntBASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 AC162801.1-201ENSMUST00000220612 198 ntBASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Upf1Q9EPU0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Gm13226-201ENSMUST00000117838 404 ntBASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Snora78-201ENSMUST00000158630 128 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms