Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2aQ9DB34 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2aQ9DB34 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2aQ9DB34 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2aQ9DB34 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.36■□□□□ 0.21
Chmp2aQ9DB34 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2aQ9DB34 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2aQ9DB34 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2aQ9DB34 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
Chmp2aQ9DB34 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.36■□□□□ 0.21
Chmp2aQ9DB34 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Chmp2aQ9DB34 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Chmp2aQ9DB34 Gm7461-201ENSMUST00000058918 827 ntBASIC16.36■□□□□ 0.21
Chmp2aQ9DB34 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2aQ9DB34 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2aQ9DB34 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2aQ9DB34 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2aQ9DB34 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2aQ9DB34 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Chmp2aQ9DB34 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2aQ9DB34 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Gm5864-201ENSMUST00000202263 970 ntBASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Gm9172-201ENSMUST00000212092 954 ntBASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2aQ9DB34 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Gm8825-201ENSMUST00000182565 998 ntBASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Gm4518-201ENSMUST00000182638 718 ntBASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2aQ9DB34 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp2aQ9DB34 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms