Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2af1Q9D883 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2af1Q9D883 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
U2af1Q9D883 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
U2af1Q9D883 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC20.57■□□□□ 0.88
U2af1Q9D883 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2af1Q9D883 Gm7669-201ENSMUST00000210184 1603 ntBASIC20.56■□□□□ 0.88
U2af1Q9D883 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1Q9D883 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
U2af1Q9D883 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1Q9D883 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1Q9D883 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1Q9D883 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1Q9D883 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC20.56■□□□□ 0.88
U2af1Q9D883 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC20.56■□□□□ 0.88
U2af1Q9D883 Gm43514-201ENSMUST00000198852 424 ntBASIC20.56■□□□□ 0.88
U2af1Q9D883 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1Q9D883 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC20.56■□□□□ 0.88
U2af1Q9D883 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1Q9D883 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1Q9D883 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1Q9D883 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
U2af1Q9D883 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1Q9D883 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1Q9D883 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1Q9D883 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
U2af1Q9D883 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
U2af1Q9D883 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
U2af1Q9D883 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1Q9D883 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1Q9D883 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1Q9D883 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1Q9D883 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1Q9D883 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1Q9D883 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.55■□□□□ 0.88
U2af1Q9D883 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
U2af1Q9D883 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1Q9D883 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.55■□□□□ 0.88
U2af1Q9D883 AC158538.2-201ENSMUST00000225455 906 ntBASIC20.55■□□□□ 0.88
U2af1Q9D883 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
U2af1Q9D883 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
U2af1Q9D883 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1Q9D883 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1Q9D883 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1Q9D883 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1Q9D883 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2af1Q9D883 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2af1Q9D883 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2af1Q9D883 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2af1Q9D883 Prkcz2-201ENSMUST00000206136 1756 ntBASIC20.54■□□□□ 0.88
U2af1Q9D883 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
U2af1Q9D883 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2af1Q9D883 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2af1Q9D883 Gm11185-201ENSMUST00000117732 1007 ntBASIC20.54■□□□□ 0.88
U2af1Q9D883 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
U2af1Q9D883 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
U2af1Q9D883 Gm27525-201ENSMUST00000184465 107 ntBASIC20.54■□□□□ 0.88
U2af1Q9D883 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC20.54■□□□□ 0.88
U2af1Q9D883 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2af1Q9D883 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2af1Q9D883 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2af1Q9D883 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2af1Q9D883 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
U2af1Q9D883 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
U2af1Q9D883 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2af1Q9D883 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
U2af1Q9D883 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
U2af1Q9D883 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2af1Q9D883 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2af1Q9D883 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC20.53■□□□□ 0.88
U2af1Q9D883 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
U2af1Q9D883 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2af1Q9D883 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2af1Q9D883 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
U2af1Q9D883 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
U2af1Q9D883 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2af1Q9D883 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC20.53■□□□□ 0.88
U2af1Q9D883 Gm37153-201ENSMUST00000193637 231 ntBASIC20.53■□□□□ 0.88
U2af1Q9D883 Gm5364-201ENSMUST00000216789 889 ntBASIC20.53■□□□□ 0.88
U2af1Q9D883 AC154222.1-201ENSMUST00000223882 475 ntBASIC20.53■□□□□ 0.88
U2af1Q9D883 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC20.53■□□□□ 0.88
U2af1Q9D883 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2af1Q9D883 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2af1Q9D883 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2af1Q9D883 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2af1Q9D883 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
U2af1Q9D883 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC20.52■□□□□ 0.88
U2af1Q9D883 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
U2af1Q9D883 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
U2af1Q9D883 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
U2af1Q9D883 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC20.52■□□□□ 0.88
U2af1Q9D883 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
U2af1Q9D883 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC20.52■□□□□ 0.88
U2af1Q9D883 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.52■□□□□ 0.88
U2af1Q9D883 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
U2af1Q9D883 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
U2af1Q9D883 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
U2af1Q9D883 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
U2af1Q9D883 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
U2af1Q9D883 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms