Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rita1Q9D1H0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rita1Q9D1H0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Gm5364-201ENSMUST00000216789 889 ntBASIC14.4□□□□□ -0.1
Rita1Q9D1H0 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rita1Q9D1H0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Gm45167-201ENSMUST00000208007 322 ntBASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rita1Q9D1H0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rita1Q9D1H0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rita1Q9D1H0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.37□□□□□ -0.11
Rita1Q9D1H0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rita1Q9D1H0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rita1Q9D1H0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Rita1Q9D1H0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.37□□□□□ -0.11
Rita1Q9D1H0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.37□□□□□ -0.11
Rita1Q9D1H0 Gm37153-201ENSMUST00000193637 231 ntBASIC14.37□□□□□ -0.11
Rita1Q9D1H0 Gm43514-201ENSMUST00000198852 424 ntBASIC14.37□□□□□ -0.11
Rita1Q9D1H0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rita1Q9D1H0 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.37□□□□□ -0.11
Rita1Q9D1H0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rita1Q9D1H0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rita1Q9D1H0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rita1Q9D1H0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rita1Q9D1H0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rita1Q9D1H0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms