Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx47Q9CWX9 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.17■□□□□ 0.18
Ddx47Q9CWX9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx47Q9CWX9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx47Q9CWX9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx47Q9CWX9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Ddx47Q9CWX9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.17■□□□□ 0.18
Ddx47Q9CWX9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx47Q9CWX9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ddx47Q9CWX9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx47Q9CWX9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx47Q9CWX9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Ddx47Q9CWX9 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.16■□□□□ 0.18
Ddx47Q9CWX9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx47Q9CWX9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx47Q9CWX9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx47Q9CWX9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx47Q9CWX9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ddx47Q9CWX9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx47Q9CWX9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.16■□□□□ 0.18
Ddx47Q9CWX9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx47Q9CWX9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx47Q9CWX9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx47Q9CWX9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx47Q9CWX9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.16■□□□□ 0.18
Ddx47Q9CWX9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.16■□□□□ 0.18
Ddx47Q9CWX9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx47Q9CWX9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx47Q9CWX9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Gm8520-201ENSMUST00000186517 868 ntBASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.15■□□□□ 0.18
Ddx47Q9CWX9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ddx47Q9CWX9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Mir1199-201ENSMUST00000117015 119 ntBASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Gm11336-201ENSMUST00000118168 334 ntBASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx47Q9CWX9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms