Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gm27628-201ENSMUST00000184911 107 ntBASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Gm5253-201ENSMUST00000187104 1025 ntBASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 AC084391.1-201ENSMUST00000200651 141 ntBASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 AC225888.1-201ENSMUST00000227184 728 ntBASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Gm16401-202ENSMUST00000197463 2074 ntBASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Gm29245-201ENSMUST00000187332 1416 ntBASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Gm14494-201ENSMUST00000118786 435 ntBASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Gm17271-201ENSMUST00000165535 355 ntBASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Gm45574-201ENSMUST00000210921 331 ntBASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 AC090659.1-201ENSMUST00000224334 768 ntBASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Ddx41-204ENSMUST00000224765 2199 ntBASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 Gm15743-202ENSMUST00000182690 1901 ntBASIC8.41□□□□□ -1.06
Sec61bQ9CQS8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Gm11873-201ENSMUST00000117877 1304 ntBASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms