Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Gm22697-201ENSMUST00000175194 63 ntBASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 BC037039-201ENSMUST00000192003 2205 ntBASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ska1Q9CPV1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ska1Q9CPV1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Gm21559-201ENSMUST00000220638 855 ntBASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Gm8587-201ENSMUST00000076538 843 ntBASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ska1Q9CPV1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ska1Q9CPV1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ska1Q9CPV1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms