Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.55■□□□□ 0.08
Trim33Q99PP7 Gm27867-201ENSMUST00000184778 125 ntBASIC15.55■□□□□ 0.08
Trim33Q99PP7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.55■□□□□ 0.08
Trim33Q99PP7 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.55■□□□□ 0.08
Trim33Q99PP7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim33Q99PP7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Trim33Q99PP7 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim33Q99PP7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trim33Q99PP7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim33Q99PP7 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim33Q99PP7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.54■□□□□ 0.08
Trim33Q99PP7 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.54■□□□□ 0.08
Trim33Q99PP7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trim33Q99PP7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim33Q99PP7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim33Q99PP7 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim33Q99PP7 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim33Q99PP7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim33Q99PP7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim33Q99PP7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim33Q99PP7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim33Q99PP7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim33Q99PP7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim33Q99PP7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC15.53■□□□□ 0.08
Trim33Q99PP7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim33Q99PP7 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim33Q99PP7 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trim33Q99PP7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim33Q99PP7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim33Q99PP7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim33Q99PP7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim33Q99PP7 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.52■□□□□ 0.08
Trim33Q99PP7 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim33Q99PP7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim33Q99PP7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.52■□□□□ 0.08
Trim33Q99PP7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim33Q99PP7 Gm25406-201ENSMUST00000157599 105 ntBASIC15.52■□□□□ 0.08
Trim33Q99PP7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.52■□□□□ 0.08
Trim33Q99PP7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim33Q99PP7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim33Q99PP7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim33Q99PP7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim33Q99PP7 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.52■□□□□ 0.08
Trim33Q99PP7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim33Q99PP7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms