Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 Thap2-203ENSMUST00000218989 527 ntBASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx6-1Q99MA9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Gm12428-201ENSMUST00000119844 727 ntBASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Mir6977-201ENSMUST00000184960 64 ntBASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Gm7774-201ENSMUST00000200064 533 ntBASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Gm20553-201ENSMUST00000204205 844 ntBASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx6-1Q99MA9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Gm27622-201ENSMUST00000183779 60 ntBASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Gm27430-201ENSMUST00000184585 107 ntBASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Gm44333-201ENSMUST00000197168 107 ntBASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx6-1Q99MA9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx6-1Q99MA9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx6-1Q99MA9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms