Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk9Q99J95 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk9Q99J95 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.82■□□□□ 0.12
Cdk9Q99J95 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.82■□□□□ 0.12
Cdk9Q99J95 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk9Q99J95 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk9Q99J95 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk9Q99J95 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk9Q99J95 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cdk9Q99J95 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cdk9Q99J95 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cdk9Q99J95 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.82■□□□□ 0.12
Cdk9Q99J95 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk9Q99J95 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk9Q99J95 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.82■□□□□ 0.12
Cdk9Q99J95 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cdk9Q99J95 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cdk9Q99J95 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk9Q99J95 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk9Q99J95 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Cdk9Q99J95 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.82■□□□□ 0.12
Cdk9Q99J95 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk9Q99J95 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.81■□□□□ 0.12
Cdk9Q99J95 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Gm36967-201ENSMUST00000193814 266 ntBASIC15.81■□□□□ 0.12
Cdk9Q99J95 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.81■□□□□ 0.12
Cdk9Q99J95 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.81■□□□□ 0.12
Cdk9Q99J95 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk9Q99J95 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.8■□□□□ 0.12
Cdk9Q99J95 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.8■□□□□ 0.12
Cdk9Q99J95 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Gm44450-201ENSMUST00000199528 114 ntBASIC15.8■□□□□ 0.12
Cdk9Q99J95 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk9Q99J95 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms