Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Gm6736-201ENSMUST00000166583 948 ntBASIC18.47■□□□□ 0.55
Col20a1Q923P0 Gm24513-201ENSMUST00000174964 138 ntBASIC18.47■□□□□ 0.55
Col20a1Q923P0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Col20a1Q923P0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Col20a1Q923P0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col20a1Q923P0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col20a1Q923P0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col20a1Q923P0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Col20a1Q923P0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col20a1Q923P0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.46■□□□□ 0.55
Col20a1Q923P0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Col20a1Q923P0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col20a1Q923P0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.46■□□□□ 0.55
Col20a1Q923P0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col20a1Q923P0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col20a1Q923P0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col20a1Q923P0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col20a1Q923P0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col20a1Q923P0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col20a1Q923P0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.46■□□□□ 0.55
Col20a1Q923P0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col20a1Q923P0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.46■□□□□ 0.55
Col20a1Q923P0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.46■□□□□ 0.55
Col20a1Q923P0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.46■□□□□ 0.55
Col20a1Q923P0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.46■□□□□ 0.55
Col20a1Q923P0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col20a1Q923P0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Col20a1Q923P0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Col20a1Q923P0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col20a1Q923P0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.45■□□□□ 0.54
Col20a1Q923P0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Gm25911-201ENSMUST00000157621 56 ntBASIC18.45■□□□□ 0.54
Col20a1Q923P0 Gm27397-201ENSMUST00000184997 107 ntBASIC18.45■□□□□ 0.54
Col20a1Q923P0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.45■□□□□ 0.54
Col20a1Q923P0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.45■□□□□ 0.54
Col20a1Q923P0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col20a1Q923P0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col20a1Q923P0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col20a1Q923P0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col20a1Q923P0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col20a1Q923P0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col20a1Q923P0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Col20a1Q923P0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Col20a1Q923P0 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.44■□□□□ 0.54
Col20a1Q923P0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col20a1Q923P0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Col20a1Q923P0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Col20a1Q923P0 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.44■□□□□ 0.54
Col20a1Q923P0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col20a1Q923P0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col20a1Q923P0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col20a1Q923P0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Col20a1Q923P0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col20a1Q923P0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col20a1Q923P0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col20a1Q923P0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col20a1Q923P0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col20a1Q923P0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.43■□□□□ 0.54
Col20a1Q923P0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col20a1Q923P0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col20a1Q923P0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.43■□□□□ 0.54
Col20a1Q923P0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.43■□□□□ 0.54
Col20a1Q923P0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col20a1Q923P0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Col20a1Q923P0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col20a1Q923P0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col20a1Q923P0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col20a1Q923P0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col20a1Q923P0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col20a1Q923P0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms