Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Gm12350-201ENSMUST00000121208 462 ntBASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha11Q91Y19 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Gm15590-201ENSMUST00000078419 552 ntBASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdha11Q91Y19 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha11Q91Y19 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha11Q91Y19 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha11Q91Y19 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdha11Q91Y19 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha11Q91Y19 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha11Q91Y19 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha11Q91Y19 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha11Q91Y19 Gm15358-201ENSMUST00000119249 520 ntBASIC16.42■□□□□ 0.22
Pcdha11Q91Y19 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.42■□□□□ 0.22
Pcdha11Q91Y19 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha11Q91Y19 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha11Q91Y19 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdha11Q91Y19 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 463.3 ms