Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Asic1-205ENSMUST00000228185 1818 ntBASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.36■□□□□ 0.21
Pcdha3Q91Y16 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Rps4l-201ENSMUST00000071745 943 ntBASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha3Q91Y16 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdha3Q91Y16 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha3Q91Y16 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha3Q91Y16 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdha3Q91Y16 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdha3Q91Y16 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.34■□□□□ 0.21
Pcdha3Q91Y16 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdha3Q91Y16 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.34■□□□□ 0.21
Pcdha3Q91Y16 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.34■□□□□ 0.21
Pcdha3Q91Y16 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.34■□□□□ 0.21
Pcdha3Q91Y16 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha3Q91Y16 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha3Q91Y16 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha3Q91Y16 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdha3Q91Y16 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdha3Q91Y16 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha3Q91Y16 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdha3Q91Y16 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.33■□□□□ 0.21
Pcdha3Q91Y16 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms