Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 App-207ENSMUST00000227737 2827 ntBASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 Gm27357-201ENSMUST00000183754 135 ntBASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.28■□□□□ 0.04
Pcdha8Q91Y12 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha8Q91Y12 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha8Q91Y12 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pcdha8Q91Y12 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha8Q91Y12 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Pcdha8Q91Y12 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha8Q91Y12 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdha8Q91Y12 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdha8Q91Y12 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.27■□□□□ 0.04
Pcdha8Q91Y12 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha8Q91Y12 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha8Q91Y12 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdha8Q91Y12 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdha8Q91Y12 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdha8Q91Y12 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdha8Q91Y12 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Gm44454-201ENSMUST00000198541 138 ntBASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.26■□□□□ 0.03
Pcdha8Q91Y12 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha8Q91Y12 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdha8Q91Y12 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdha8Q91Y12 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha8Q91Y12 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.25■□□□□ 0.03
Pcdha8Q91Y12 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdha8Q91Y12 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha8Q91Y12 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.25■□□□□ 0.03
Pcdha8Q91Y12 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdha8Q91Y12 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha8Q91Y12 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha8Q91Y12 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdha8Q91Y12 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms